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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952631.1_cds_XP_016492213.1_82448
CDS Infomation

[gene=LOC107811734] [db_xref=GeneID:107811734] [protein=fimbrin-2-like] [protein_id=XP_016492213.1] [location=join(11409..11495,11602..11772,12663..12904,12998..13169,13795..13833,14046..14114,14210..14326,14840..15051,15636..15791,15990..16189,16278..16435,17075..17171,17933..18024,18357..18539)] [gbkey=CDS]
Sequence

ATGGCTGGATATGTAGGTGTACTGGTATCGGATCCATGGCTGCAAAATCAGTTCACTCAG
GTGGAGCTTCGGAGTTTAAAATCTCACTTTAACACGATGAAGAAAGAGAACGGAGGTCTG
ATGCTCGCCGACTTGCCTTCACAAATGGCGAAACTGAAACACGTCGGAGAGAATCTTACG
GAGCAAGACAGAGAGTTGTTTCTCAGAGATTCCTATAAATGTTTGGATGAAGACGTTGAT
TTCGAATTATTTCTTCGGGTTTATTTGGAACTCCAAGCACATGCCACAGCAAGAATGGGA
AATAGCGTCAAGAATTCATCAGCTTTCCTAAAGTCTCCAACTTCTACGCTACTCCACACA
ATTAGTGAATCCGAGAAGGCATCATATGTTGCCCATATTAACAACTATCTTGCAGAAGAT
GAATTTTTGAAAAAATTCCTTCCTATTGATCCTTCTACTAATGATCTCTTTGAGGTTGCC
AAGGACGGAGTTCTTATCTGCAAGCTTATCAATGTGGCCGTACCTGGAACAATTGATGAA
CGAGCAATAAATATGAAGAGAATGCTTAATCCATGGGAAAGGAATGAAAATCATACATTG
TGCCTTAACTCTGCCAAGGCAATTGGATGTACTGTGGTCAATATTGGGACTCAAGACTTC
ATTGAAGGGAGGAGGCATCTTGTTCTTGGAGTGATATCCCAAATTATTAAAATTCAACTA
TTGGCAGACCTCAATCTAAAGAAAACACCTCAATTGGTCGAGTTAGTTGACGATAGCCAG
GAAGTAGAGGAGCTGATGAGCCTTCCTCCAGAAAAGATCCTGCTTAGATGGATGAATTTT
CAATTGAAGAAATCTGGATACAAGAAAATCGTGACAAACTTCTCTTCTGACATAAAGGAT
GGAGAAGCTTATGCTCACCTCCTAAATGTACTAGCCCCTGAGTATACCAATCCTTCAACG
CTCACTGTGAGAGACCCTTTAGGAAGAGCAAAATTGGTTCTGGAACATGCAGATAGGATG
GGCTGCAAAAGATATTTAACGGCGAAAGATATTGTGGAAGGTTCTCCAAATCTTAACCTT
GCATTTGTGGCACATATCTTTCAGCATAGGAATGGCCTTTCAACCCAAACAAAGCAGATA
TCCTTTGTTGAGATATCACCAGATGAAGCTCAGATGTCCAGGGAAGAAAGATCATTTCGC
TTTTGGATCAATAGTCTTGGAAATTCATCATACATAGACAATGTTTTCGAAGATCTGAGA
GATGGATGGGTGCTTTTGGAGACACTTGACAAGGTCTCCCCAGGAATTGTTAATTGGAAA
ATTGCCACTAAACCTCCAATTAAGATGCCTTTTAGAAAAGTAGAAAATTGCAACCAAGTT
GTCAAGATTGGCAAACAATTGAAGTTTTCCTTAGTAAATATTGCTGGAAATGACGTTGTG
CAGGGAAACAAGAAGTTAATATTGGCTTACTTGTGGCAGTTAATGAGATGTAACATGCTT
CAGCTCTTAAAGAATTTGAGATTTCACTCCCATGGGAGGGAAATTACCGACGCCCACATT
TTAGAGTGGGCTAACAGCAAAGTAAGAAACTCAGGAAGCCAGAGTCATATGGCAAGTTTT
AAGGATAAAAATTTGTCAACTGGAATCTTTTTCCTTGAACTGCTAAGTTCTGTTCATCCT
CGAGCTGTTAACTGGAGTCTTGTTACAAAAGGGGAAACTGATGAGCAGAAGAAAATGAAC
GCGACCTACATAATCAGTATCGCGAGAAAGCTCGGATGTTCAATATTTTTGTTACCTGAA
GATTTAATTGAGGTAAATCAAAAGATGATCCTTACGCTGACAGCAAGTATAATGTATTGG
CACTTGAAACAACCATTGGAGGACCAAACTTTTGCATCATCAGATAGTGATAGTAGCTCG
GTGGACACAGCCTCAACCTCAACGTTGGACGATACAGCTTCTGAGTCTTCAGCAGAAGAT
ATTAGTAACAGATAA

Peptide Sequence

PEP ID

XP_016492213.1
PEP Infomation

PREDICTED: fimbrin-2-like [Nicotiana tabacum]
Sequence

MAGYVGVLVSDPWLQNQFTQVELRSLKSHFNTMKKENGGLMLADLPSQMAKLKHVGENLT
EQDRELFLRDSYKCLDEDVDFELFLRVYLELQAHATARMGNSVKNSSAFLKSPTSTLLHT
ISESEKASYVAHINNYLAEDEFLKKFLPIDPSTNDLFEVAKDGVLICKLINVAVPGTIDE
RAINMKRMLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGVISQIIKIQL
LADLNLKKTPQLVELVDDSQEVEELMSLPPEKILLRWMNFQLKKSGYKKIVTNFSSDIKD
GEAYAHLLNVLAPEYTNPSTLTVRDPLGRAKLVLEHADRMGCKRYLTAKDIVEGSPNLNL
AFVAHIFQHRNGLSTQTKQISFVEISPDEAQMSREERSFRFWINSLGNSSYIDNVFEDLR
DGWVLLETLDKVSPGIVNWKIATKPPIKMPFRKVENCNQVVKIGKQLKFSLVNIAGNDVV
QGNKKLILAYLWQLMRCNMLQLLKNLRFHSHGREITDAHILEWANSKVRNSGSQSHMASF
KDKNLSTGIFFLELLSSVHPRAVNWSLVTKGETDEQKKMNATYIISIARKLGCSIFLLPE
DLIEVNQKMILTLTASIMYWHLKQPLEDQTFASSDSDSSSVDTASTSTLDDTASESSAED
ISNR

Transcript Sequence

Gene sequence data has not been registered.